Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Multicellular Organismal Development (GO:0007275) Genes Targeted by hsa-mir-196b in GCT Seminoma Korkola Cluster 36 Table contains all genes in the GCT Seminoma Korkola cluster number 36. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-196b GO:0007275 928 CD9 CD9 molecule [Source:HGNC Symbol;Acc:1709] zzz999 Yes 1400 CRMP1 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:2365] zzz999 Yes 81029 WNT5B wingless-type MMTV integration site family, member 5B [Source:HGNC Symbol;Acc:16265] zzz999 Yes 4585 MUC4 mucin 4, cell surface associated [Source:HGNC Symbol;Acc:7514] zzz999 4489 MT1A metallothionein 1A [Source:HGNC Symbol;Acc:7393] zzz999 6236 RRAD Ras-related associated with diabetes [Source:HGNC Symbol;Acc:10446] zzz999 8820 HESX1 HESX homeobox 1 [Source:HGNC Symbol;Acc:4877] zzz999 Yes 586 BCAT1 branched chain amino-acid transaminase 1, cytosolic [Source:HGNC Symbol;Acc:976] P T 4502 MT2A metallothionein 2A [Source:HGNC Symbol;Acc:7406] zzz999 2562 GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:HGNC Symbol;Acc:4083] zzz999 80823 BHLHB9 basic helix-loop-helix domain containing, class B, 9 [Source:HGNC Symbol;Acc:29353] zzz999 7447 VSNL1 visinin-like 1 [Source:HGNC Symbol;Acc:12722] P 2249 FGF4 fibroblast growth factor 4 [Source:HGNC Symbol;Acc:3682] zzz999 Yes 84272 YIPF4 Yip1 domain family, member 4 [Source:HGNC Symbol;Acc:28145] zzz999 57758 SCUBE2 signal peptide, CUB domain, EGF-like 2 [Source:HGNC Symbol;Acc:30425] zzz999 4495 MT1G metallothionein 1G [Source:HGNC Symbol;Acc:7399] zzz999 11274 USP18 ubiquitin specific peptidase 18 [Source:HGNC Symbol;Acc:12616] zzz999 92579 G6PC3 glucose 6 phosphatase, catalytic, 3 [Source:HGNC Symbol;Acc:24861] zzz999 5727 PTCH1 patched 1 [Source:HGNC Symbol;Acc:9585] zzz999 Yes 9573 GDF3 growth differentiation factor 3 [Source:HGNC Symbol;Acc:4218] zzz999 5167 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:3356] zzz999 Yes 793 CALB1 calbindin 1, 28kDa [Source:HGNC Symbol;Acc:1434] zzz999 Yes 1649 DDIT3 DNA-damage-inducible transcript 3 [Source:HGNC Symbol;Acc:2726] zzz999 Yes 79805 VASH2 vasohibin 2 [Source:HGNC Symbol;Acc:25723] zzz999 Yes 51083 GAL galanin prepropeptide [Source:HGNC Symbol;Acc:4114] zzz999 Yes 79842 ZBTB3 zinc finger and BTB domain containing 3 [Source:HGNC Symbol;Acc:22918] zzz999 7357 UGCG UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:12524] zzz999 Yes 29947 DNMT3L DNA (cytosine-5-)-methyltransferase 3-like [Source:HGNC Symbol;Acc:2980] zzz999 Yes 63935 PCIF1 PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:16200] zzz999 16 AARS alanyl-tRNA synthetase [Source:HGNC Symbol;Acc:20] zzz999 51268 PIPOX pipecolic acid oxidase [Source:HGNC Symbol;Acc:17804] zzz999 5122 PCSK1 proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:8743] zzz999 Yes 5125 PCSK5 proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:8747] zzz999 Yes 4501 MT1X metallothionein 1X [Source:HGNC Symbol;Acc:7405] zzz999 56548 CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:HGNC Symbol;Acc:13817] zzz999 9429 ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 [Source:HGNC Symbol;Acc:74] zzz999 2735 GLI1 GLI family zinc finger 1 [Source:HGNC Symbol;Acc:4317] zzz999 Yes 7726 TRIM26 tripartite motif containing 26 [Source:HGNC Symbol;Acc:12962] zzz999 26207 PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:21045] zzz999 1299 COL9A3 collagen, type IX, alpha 3 [Source:HGNC Symbol;Acc:2219] zzz999 Yes 5973 RENBP renin binding protein [Source:HGNC Symbol;Acc:9959] zzz999 4345 CD200 CD200 molecule [Source:HGNC Symbol;Acc:7203] zzz999 5803 PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 [Source:HGNC Symbol;Acc:9685] zzz999 Yes 136 ADORA2B adenosine A2b receptor [Source:HGNC Symbol;Acc:264] zzz999 Yes 1294 COL7A1 collagen, type VII, alpha 1 [Source:HGNC Symbol;Acc:2214] zzz999 Yes 5801 PTPRR protein tyrosine phosphatase, receptor type, R [Source:HGNC Symbol;Acc:9680] zzz999 Yes 10149 GPR64 G protein-coupled receptor 64 [Source:HGNC Symbol;Acc:4516] zzz999 2247 FGF2 fibroblast growth factor 2 (basic) [Source:HGNC Symbol;Acc:3676] zzz999 Yes 5090 PBX3 pre-B-cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:8634] P Yes 479 ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide [Source:HGNC Symbol;Acc:13816] zzz999 221692 PHACTR1 phosphatase and actin regulator 1 [Source:HGNC Symbol;Acc:20990] zzz999 4935 GPR143 G protein-coupled receptor 143 [Source:HGNC Symbol;Acc:20145] zzz999 7079 TIMP4 TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:11823] zzz999 Yes 10493 VAT1 vesicle amine transport protein 1 homolog (T. californica) [Source:HGNC Symbol;Acc:16919] zzz999 55501 CHST12 carbohydrate (chondroitin 4) sulfotransferase 12 [Source:HGNC Symbol;Acc:17423] zzz999 54187 NANS N-acetylneuraminic acid synthase [Source:HGNC Symbol;Acc:19237] zzz999 3098 HK1 hexokinase 1 [Source:HGNC Symbol;Acc:4922] zzz999 8522 GAS7 growth arrest-specific 7 [Source:HGNC Symbol;Acc:4169] P T Yes 1789 DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta [Source:HGNC Symbol;Acc:2979] zzz999 Yes 874 CBR3 carbonyl reductase 3 [Source:HGNC Symbol;Acc:1549] zzz999 10157 AASS aminoadipate-semialdehyde synthase [Source:HGNC Symbol;Acc:17366] zzz999 2824 GPM6B glycoprotein M6B [Source:HGNC Symbol;Acc:4461] zzz999 Yes 2171 FABP5 fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] zzz999 Yes 943 TNFRSF8 tumor necrosis factor receptor superfamily, member 8 [Source:HGNC Symbol;Acc:11923] zzz999 7262 PHLDA2 pleckstrin homology-like domain, family A, member 2 [Source:HGNC Symbol;Acc:12385] zzz999 Yes 7360 UGP2 UDP-glucose pyrophosphorylase 2 [Source:HGNC Symbol;Acc:12527] zzz999 57556 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:HGNC Symbol;Acc:10738] zzz999 Yes 2842 GPR19 G protein-coupled receptor 19 [Source:HGNC Symbol;Acc:4473] zzz999 5272 SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 [Source:HGNC Symbol;Acc:8955] zzz999 7013 TERF1 telomeric repeat binding factor (NIMA-interacting) 1 [Source:HGNC Symbol;Acc:11728] zzz999 63978 PRDM14 PR domain containing 14 [Source:HGNC Symbol;Acc:14001] zzz999 11061 LECT1 leukocyte cell derived chemotaxin 1 [Source:HGNC Symbol;Acc:17005] zzz999 Yes 51339 DACT1 dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) [Source:HGNC Symbol;Acc:17748] zzz999 Yes 3198 HOXA1 homeobox A1 [Source:HGNC Symbol;Acc:5099] P Yes 23710 GABARAPL1 GABA(A) receptor-associated protein like 1 [Source:HGNC Symbol;Acc:4068] zzz999 8651 SOCS1 suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:19383] zzz999 Yes 3212 HOXB2 homeobox B2 [Source:HGNC Symbol;Acc:5113] zzz999 Yes 8291 DYSF dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:HGNC Symbol;Acc:3097] zzz999 2019 EN1 engrailed homeobox 1 [Source:HGNC Symbol;Acc:3342] zzz999 Yes 377 ARF3 ADP-ribosylation factor 3 [Source:HGNC Symbol;Acc:654] zzz999 4499 MT1M metallothionein 1M [Source:HGNC Symbol;Acc:14296] zzz999 10647 SCGB1D2 secretoglobin, family 1D, member 2 [Source:HGNC Symbol;Acc:18396] zzz999 4493 MT1E metallothionein 1E [Source:HGNC Symbol;Acc:7397] zzz999 8744 TNFSF9 tumor necrosis factor (ligand) superfamily, member 9 [Source:HGNC Symbol;Acc:11939] zzz999 326 AIRE autoimmune regulator [Source:HGNC Symbol;Acc:360] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.